Simulate Trajectory From one SPN Model — sim_trajectory_base

This is an internal function to sim_trajectory_R. It does the actual sampling once all of the functions have been checked and setup.

sim_trajectory_base_R(
  x0,
  times,
  num_reps,
  stepFun,
  events = NULL,
  batch = NULL,
  Sout = NULL,
  verbose = TRUE
)

Arguments

x0	the initial marking of the SPN (initial state)
times	sequence of sampling times
num_reps	number of repetitions to run
stepFun	a sampling function
events	a `data.frame` of events (uses the same format as required in package `deSolve` for consistency, see `events` for more information)
batch	a `list` of batch migration events, created from `batch_migration`, may be set to `NULL` if not used
Sout	an optional matrix to track event firings
verbose	print a progress bar?

matrix of sampled values