Inheritance Cube: Immunizing Reversal/Basic Reversal — cubeImmunizingReversalMF • MGDrivE

This function creates an Immunizing Reversal construct, it has 5 alleles at 1 locus

W: Wild-type
H: Homing allele
E: Eraser allele
R: No-cost resistance allele
B: Detrimental resistance allele

Usage

cubeImmunizingReversalMF(
  cHWM = 1,
  cHWF = 1,
  cEWM = 1,
  cEWF = 1,
  cEHM = 1,
  cEHF = 1,
  chHWM = 0,
  chHWF = 0,
  crHWM = 0,
  crHWF = 0,
  ceEWM = 0,
  ceEWF = 0,
  crEWM = 0,
  crEWF = 0,
  ceEHM = 0,
  ceEHF = 0,
  crEHM = 0,
  crEHF = 0,
  dHW = 0,
  dEW = 0,
  dEH = 0,
  dhHW = 0,
  drHW = 0,
  deEW = 0,
  drEW = 0,
  deEH = 0,
  drEH = 0,
  eta = NULL,
  phi = NULL,
  omega = NULL,
  xiF = NULL,
  xiM = NULL,
  s = NULL
)

Arguments

cHWM: Cutting efficiency of H into W in males
cHWF: Cutting efficiency of H into W in females
cEWM: Cutting efficiency of E into W in males
cEWF: Cutting efficiency of E into W in females
cEHM: Cutting efficiency of E into H in males
cEHF: Cutting efficiency of E into H in females
chHWM: Homing efficiency of H into W in males
chHWF: Homing efficiency of H into W in females
crHWM: Resistance efficiency of H into W in males
crHWF: Resistance efficiency of H into W in females
ceEWM: Homing efficiency of E into W in males
ceEWF: Homing efficiency of E into W in females
crEWM: Resistance efficiency of E into W in males
crEWF: Resistance efficiency of E into W in females
ceEHM: Homing efficiency of E into H in males
ceEHF: Homing efficiency of E into H in females
crEHM: Resistance efficiency of E into H in males
crEHF: Resistance efficiency of E into H in females
dHW: Deposition cutting efficiency of H into W
dEW: Deposition cutting efficiency of E in to W
dEH: Deposition cutting efficiency of E into H
dhHW: Deposition homing efficiency of H into W
drHW: Deposition resistance efficiency of H into W
deEW: Deposition homing efficiency of E into W
drEW: Deposition resistance efficiency of E into W
deEH: Deposition homing efficiency of E into H
drEH: Deposition resistance efficiency of E into H
eta: Genotype-specific mating fitness
phi: Genotype-specific sex ratio at emergence
omega: Genotype-specific multiplicative modifier of adult mortality
xiF: Genotype-specific female pupatory success
xiM: Genotype-specific male pupatory success
s: Genotype-specific fractional reduction(increase) in fertility

Value

Named list containing the inheritance cube, transition matrix, genotypes, wild-type allele, and all genotype-specific parameters.

Details

This is the general form for an immunizing reversal drive. If the EW terms are 0, then this simplifies to a basic reversal drive.This drive handles different male and female homing rates, and female deposition from each allele, signifying differential expression from an autosome.