Inheritance Cube: Confinable Homing

This function creates a confinable homing construct, it has 4 alleles at the first locus and 3 alleles at the second.

• W: Wild-type

• H: Homing allele

• A: Antidote allele

• R: No-cost resistance allele

• B: Detrimental resistance allele

Usage

cubeConfinableHoming(
  cF = 1,
  cM = 1,
  chF = 0,
  crF = 0,
  chM = 0,
  crM = 0,
  dR = 0,
  dB = 0,
  crossF = 0,
  crossM = 0,
  eta = NULL,
  phi = NULL,
  omega = NULL,
  xiF = NULL,
  xiM = NULL,
  s = NULL
)

Arguments

cF

Cutting efficiency of drive allele at locus 1 in females

cM

Cutting efficiency of drive allele at locus 1 in males

chF

Homing efficiency of drive allele at locus 1 in females

crF

Resistance allele generation rate at locus 1 in females

chM

Homing efficiency of drive allele at locus 1 in males

crM

Resistance allele generation rate at locus 1 in males

dR

Background mutation rate from W and H into R allele in males and females

dB

Background mutation rate from A into B allele in males and females

crossF

Female crossover rate

crossM

Male crossover rate

eta

Genotype-specific mating fitness

phi

Genotype-specific sex ratio at emergence

omega

Genotype-specific multiplicative modifier of adult mortality

xiF

Genotype-specific female pupatory success

xiM

Genotype-specific male pupatory success

s

Genotype-specific fractional reduction(increase) in fertility

Value

Named list containing the inheritance cube, transition matrix, genotypes, wild-type allele, and all genotype-specific parameters.